Clinical endpoints

This page contains downloadable excel sheets that contain the definitions for clinical endpoints and corresponding control groups for the current FinnGen data freeze.

These endpoint and control definitions are work of Tuomo Kiiskinen, Sami Koskelainen, Elisa Lahtela, Aki S. Havulinna, the FinnGen clinical expert groups and others at FIMM and THL. Use freely but if used extensively, please mention the source. This is still work in progress and comments can be sent to finngen-endpoints@helsinki.fi.

 

RISTEYS

‌Have you already tried risteys.finngen.fi (Risteys = intersection in Finnish)? It allows browsing of the FinnGen data at the phenotype level, including endpoint definitions, statistics about number of individuals, gender distribution, and longitudinal relationships.

 

Current endpoint and control definitions:

endpoints - DF9 

control definitions - DF9

What's new in DF9 endpoints

FinnGen core and non-core endpoints and controls DF9

endpoints – file format description

Changelog DF9_DF8_endpoints and controls

 

Previous endpoint and control definitions:

Here you can find the previous endpoint and control definitions used for Data Freezes 2 - 8:

 

endpoints - DF8 

control definitions - DF8

What's new in DF8 endpoints

FinnGen core and non-core endpoints and controls DF8

endpoints – file format description

Changelog DF8_DF7_endpoints and controls

 

endpoints - DF7

control definitions - DF7

endpoints – file format description

 

endpoints - DF6

control definitions - DF6

endpoints – file format description (same as in DF5)

 

endpoints - DF5

control definitions - DF5

endpoints – file format description

 

endpoints - DF4

control definitions - DF4

endpoints – file format description

 

endpoints - DF3

control definitions - DF3

 

endpoints - DF2

control definitions - DF2