Access results
Latest data release:
Total sample size: 260,405 (147,061 females and 113,344 males)
Total number of variants analyzed: 16,962,023 variants
Number of disease endpoints (phenotypes) available: 2,861 endpoints
Data released to the partners: Q3 2020
Public data release: January 24 2022
Thorough documentation is available here.
Please note that the allele frequency column provides the human reference genome alternative allele (not minor allele) frequency. All effect sizes and allele frequencies are reported in terms of alternate allele.
How to access the summary statistics:
- Fill this online form to gain access to Finngen GWAS summary statistics.
- Instructions on how to download summary statistics are sent to you by e-mail.
- Download the data
Please remember to acknowledge the FinnGen study when using these results in publications.
You can use the following text:
“We want to acknowledge the participants and investigators of the FinnGen study”
Browsing the results:
The web browser r6.finngen.fi contains all FinnGen GWAS results from release 6 and provides you with three options:
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Search for the GWAS result of a variant, phenotype or gene.
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Explore the loss-of-function burden (LoF) for gene-phenotypes combinations.
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Find a particular phenotype/endpoint.
Risteys
Risteys tool (Risteys = intersection in Finnish) allows browsing of the FinnGen data at the phenotype level, including endpoint definitions, statistics about number of individuals, gender distribution, and longitudinal relationships. For this data release, please visit: r6.risteys.finngen.fi.
Individual level data
In case you are interested in accessing individual level biobank samples and data or recontacting Finnish biobank participants, please visit the Fingenious portal hosted by the Finnish Biobank Cooperative FINBB for more information.
Earlier data releases:
May 11 2021
Total sample size: 218,792
Total number of variants analyzed: 16,962,023 variants
Number of disease endpoints (phenotypes) available: 2,803 endpoints
Data released to the partners: Q2 2020
Public data release: May 11 2021
Browser: r5.finngen.fi
November 30 2020:
Total sample size: 176,899
Total number of variants analyzed: 16,962,023 variants
Number of disease endpoints (phenotypes) available: 2,444 endpoints
Data released to the partners: Q4 2019
Public data release: Nov 30, 2020
Browser: r4.finngen.fi
Thorough documentation is available here
June 16 2020:
Total sample size: 135,638
Total number of variants analyzed: 16,962,023 variants
Number of disease endpoints (phenotypes) available: 1,801 endpoints
Data released to the partners: Q2 2019 (May)
Public data release: June 16 2020
Browser: r3.finngen.fi
Thorough documentation is available here
New feature: LD estimation from SISu v3 reference panel
January 14 2020:
Total sample size: 96,499
Total number of variants analyzed: 16,152,119 variants
Number of disease endpoints (phenotypes) available: 1,122 endpoints
Data released to the partners: Q4 2018 (Nov 27)
Public data release: Jan 14 2020
Browser: r2.finngen.fi
Thorough documentation is available here